Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent zinc protease | SHEW_RS10815 | Not Available | Positive | 2409468 - 2410205 | 27123.1 |
| inactive transglutaminase family protein | SHEW_RS10820 | Not Available | Positive | 2410221 - 2411726 | 55616.9 |
| alpha-l-glutamate ligase-like protein | SHEW_RS10825 | Not Available | Positive | 2411729 - 2412685 | 34981.6 |
| hypothetical protein | SHEW_RS20115 | Not Available | Positive | 2412648 - 2414423 | 66265.5 |
| duf3541 domain-containing protein | SHEW_RS10835 | Not Available | Positive | 2414398 - 2415549 | 42977.8 |
| lysr family transcriptional regulator | SHEW_RS10840 | Not Available | Positive | 2415565 - 2416476 | 33328.3 |
| putative metalloprotease cjm1_0395 family protein | SHEW_RS20120 | Not Available | Negative | 2416453 - 2417421 | 33470.7 |
| hypothetical protein | SHEW_RS10850 | Not Available | Negative | 2417854 - 2418123 | 9017.39 |
| 2-iminoacetate synthase thih | SHEW_RS10855 | Not Available | Negative | 2418226 - 2419344 | 41740.1 |
| thiazole synthase | SHEW_RS10860 | Not Available | Negative | 2419349 - 2420122 | 26985.9 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
