Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lactoylglutathione lyase | SHEW_RS10765 | Not Available | Positive | 2395525 - 2395935 | 14979.8 |
| tonb-dependent receptor plug domain-containing protein | SHEW_RS10770 | Not Available | Negative | 2395994 - 2398504 | 90110.0 |
| holliday junction branch migration dna helicase ruvb | SHEW_RS10775 | Not Available | Negative | 2399610 - 2400623 | 37395.2 |
| holliday junction branch migration protein ruva | SHEW_RS10780 | Not Available | Negative | 2400643 - 2401260 | 22516.5 |
| crossover junction endodeoxyribonuclease ruvc | SHEW_RS10785 | Not Available | Negative | 2401257 - 2401778 | 18601.5 |
| yebc/pmpr family dna-binding transcriptional regulator | SHEW_RS10790 | Not Available | Negative | 2401786 - 2402532 | 26677.9 |
| aspartate--trna ligase | SHEW_RS10795 | Not Available | Negative | 2402603 - 2404381 | 65943.1 |
| transporter substrate-binding domain-containing protein | SHEW_RS10800 | Not Available | Negative | 2404551 - 2407307 | 102856.0 |
| carboxy-s-adenosyl-l-methionine synthase cmoa | SHEW_RS10805 | Not Available | Positive | 2407722 - 2408453 | 27406.8 |
| trna 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase cmob | SHEW_RS10810 | Not Available | Positive | 2408450 - 2409442 | 37758.2 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
