Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna 2-thiocytidine(32) synthetase ttca | SHEW_RS10315 | Not Available | Positive | 2306767 - 2307720 | 35405.7 |
| duf2987 domain-containing protein | SHEW_RS10320 | Not Available | Negative | 2307800 - 2308423 | 23011.8 |
| glucosaminidase domain-containing protein | SHEW_RS10325 | Not Available | Negative | 2308401 - 2309228 | 31191.3 |
| uridine diphosphate-n-acetylglucosamine-binding protein yvck | SHEW_RS10330 | Not Available | Positive | 2309364 - 2310275 | 32743.8 |
| amino acid aminotransferase | SHEW_RS10335 | Not Available | Negative | 2310338 - 2311531 | 43247.7 |
| Trna-leu | Not Available | Not Available | Positive | 2311927 - 2312013 | Not Available |
| Trna-cys | Not Available | Not Available | Positive | 2312052 - 2312125 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 2312161 - 2312236 | Not Available |
| glyceraldehyde-3-phosphate dehydrogenase | SHEW_RS10355 | Not Available | Negative | 2312470 - 2313906 | 52765.0 |
| duf2989 domain-containing protein | SHEW_RS10360 | Not Available | Positive | 2314143 - 2314949 | 30350.7 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
