Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| integration host factor subunit beta | SHEW_RS10120 | Not Available | Positive | 2261338 - 2261625 | 10664.8 |
| lapa family protein | SHEW_RS10125 | Not Available | Positive | 2261748 - 2262065 | 11856.9 |
| lipopolysaccharide assembly protein lapb | SHEW_RS10130 | Not Available | Positive | 2262067 - 2263227 | 44341.5 |
| orotidine-5'-phosphate decarboxylase | SHEW_RS10135 | Not Available | Positive | 2263263 - 2263958 | 24757.2 |
| sdr family oxidoreductase | SHEW_RS10140 | Not Available | Positive | 2264022 - 2264837 | 28242.1 |
| duf2058 domain-containing protein | SHEW_RS10145 | Not Available | Positive | 2264876 - 2265418 | 20638.7 |
| acyl-coa dehydrogenase | SHEW_RS10150 | Not Available | Positive | 2265581 - 2267332 | 63132.2 |
| d-alanyl-d-alanine carboxypeptidase/d-alanyl-d-alanine-endopeptidase | SHEW_RS10155 | Not Available | Negative | 2267440 - 2269071 | 58768.7 |
| hypothetical protein | SHEW_RS20585 | Not Available | Negative | 2269106 - 2269282 | 6694.53 |
| duf1904 domain-containing protein | SHEW_RS10160 | Not Available | Positive | 2269513 - 2269845 | 12760.5 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
