Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class ia ribonucleoside-diphosphate reductase subunit beta | SHEW_RS10070 | Not Available | Negative | 2246079 - 2247209 | 43225.4 |
| class 1a ribonucleoside-diphosphate reductase subunit alpha | SHEW_RS10075 | Not Available | Negative | 2247269 - 2249557 | 85692.1 |
| had family hydrolase | SHEW_RS10080 | Not Available | Negative | 2250038 - 2250694 | 23562.2 |
| bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-o-methyltransferase ubig | SHEW_RS10085 | Not Available | Negative | 2250750 - 2251538 | 28934.7 |
| dna topoisomerase (atp-hydrolyzing) subunit a | SHEW_RS10090 | Not Available | Positive | 2251792 - 2254431 | 97220.5 |
| 3-phosphoserine/phosphohydroxythreonine transaminase | SHEW_RS10095 | Not Available | Positive | 2254562 - 2255656 | 40193.1 |
| amino acid aminotransferase | SHEW_RS10100 | Not Available | Negative | 2255769 - 2256959 | 43365.0 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | SHEW_RS10105 | Not Available | Positive | 2257349 - 2258629 | 45686.9 |
| (d)cmp kinase | SHEW_RS10110 | Not Available | Positive | 2258806 - 2259498 | 24845.8 |
| 30s ribosomal protein s1 | SHEW_RS10115 | Not Available | Positive | 2259598 - 2261265 | 61206.4 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
