Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf885 domain-containing protein | SHEW_RS10020 | Not Available | Positive | 2235127 - 2236905 | 67399.1 |
| response regulator transcription factor | SHEW_RS10025 | Not Available | Positive | 2237070 - 2237750 | 25608.4 |
| m14-type cytosolic carboxypeptidase | SHEW_RS10030 | Not Available | Positive | 2237876 - 2239003 | 42244.7 |
| hypothetical protein | SHEW_RS10035 | Not Available | Positive | 2239013 - 2239330 | 11569.3 |
| yeac family protein | SHEW_RS10040 | Not Available | Positive | 2239327 - 2239608 | 10718.6 |
| asparaginase | SHEW_RS10045 | Not Available | Negative | 2239668 - 2240681 | 36643.4 |
| signal peptide peptidase sppa | SHEW_RS10050 | Not Available | Negative | 2240803 - 2242644 | 67506.4 |
| nadph-dependent 2,4-dienoyl-coa reductase | SHEW_RS10055 | Not Available | Positive | 2242810 - 2244825 | 73308.2 |
| ycii family protein | SHEW_RS10060 | Not Available | Positive | 2245042 - 2245449 | 14924.0 |
| class i ribonucleotide reductase maintenance protein yfae | SHEW_RS10065 | Not Available | Negative | 2245730 - 2246110 | 13641.4 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
