Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-ketoacid dehydrogenase subunit beta | SHEW_RS09965 | Not Available | Positive | 2223713 - 2224690 | 35445.3 |
| dihydrolipoyllysine-residue acetyltransferase | SHEW_RS09970 | Not Available | Positive | 2224702 - 2226264 | 56139.6 |
| quinolinate synthase nada | SHEW_RS09975 | Not Available | Positive | 2226384 - 2227451 | 38696.5 |
| methyl-accepting chemotaxis protein | SHEW_RS09980 | Not Available | Positive | 2227766 - 2229754 | 72517.4 |
| Trna-ser | Not Available | Not Available | Positive | 2229890 - 2229977 | Not Available |
| ribbon-helix-helix domain-containing protein | SHEW_RS09995 | Not Available | Positive | 2230313 - 2230504 | 7103.54 |
| zinc ribbon domain-containing protein yjdm | SHEW_RS10000 | Not Available | Positive | 2230705 - 2231049 | 12486.0 |
| cardiolipin synthase | SHEW_RS10005 | Not Available | Negative | 2231216 - 2232730 | 57046.4 |
| endonuclease/exonuclease/phosphatase family protein | SHEW_RS10010 | Not Available | Positive | 2232895 - 2233773 | 33164.1 |
| substrate-binding periplasmic protein | SHEW_RS20840 | Not Available | Negative | 2233820 - 2234362 | 21368.5 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
