Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-directed rna polymerase subunit alpha | SHEW_RS00945 | Not Available | Positive | 191415 - 192404 | 36203.3 |
| 50s ribosomal protein l17 | SHEW_RS00950 | Not Available | Positive | 192444 - 192836 | 14659.8 |
| abc transporter substrate-binding protein | SHEW_RS00955 | Not Available | Negative | 192893 - 193870 | 36385.8 |
| cytochrome c maturation protein ccme | SHEW_RS00960 | Not Available | Negative | 194005 - 194490 | 17420.0 |
| heme exporter protein ccmd | SHEW_RS00965 | Not Available | Negative | 194487 - 194687 | 7725.47 |
| heme abc transporter permease | SHEW_RS00970 | Not Available | Negative | 194687 - 195433 | 27501.1 |
| heme exporter protein ccmb | SHEW_RS00975 | Not Available | Negative | 195435 - 196121 | 24100.9 |
| cytochrome c biogenesis heme-transporting atpase ccma | SHEW_RS00980 | Not Available | Negative | 196133 - 196783 | 24257.9 |
| c-type cytochrome | SHEW_RS00985 | Not Available | Positive | 197116 - 197409 | 10098.2 |
| c-type cytochrome biogenesis protein ccmi | SHEW_RS00990 | Not Available | Negative | 197601 - 198851 | 45575.9 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
