Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | SHEW_RS09770 | Not Available | Negative | 2175650 - 2178478 | 103407.0 |
| alpha-glucosidase family protein | SHEW_RS09775 | Not Available | Positive | 2178964 - 2180589 | 61628.2 |
| sugar mfs transporter | SHEW_RS09780 | Not Available | Positive | 2180729 - 2181994 | 44155.7 |
| rsmb/nop family class i sam-dependent rna methyltransferase | SHEW_RS09785 | Not Available | Positive | 2182147 - 2183367 | 45008.0 |
| dead/deah box helicase | SHEW_RS20110 | Not Available | Positive | 2183608 - 2187027 | 127091.0 |
| secondary thiamine-phosphate synthase enzyme yjbq | SHEW_RS09795 | Not Available | Negative | 2187086 - 2187505 | 15829.7 |
| vrr-nuc domain-containing protein | SHEW_RS09800 | Not Available | Positive | 2187813 - 2189663 | 70499.9 |
| tlpa disulfide reductase family protein | SHEW_RS09805 | Not Available | Positive | 2189870 - 2190442 | 21298.7 |
| duf4266 domain-containing protein | SHEW_RS09810 | Not Available | Positive | 2190432 - 2190650 | 7778.36 |
| duf3570 domain-containing protein | SHEW_RS09815 | Not Available | Positive | 2190796 - 2192133 | 49742.9 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
