Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)h-dependent flavin oxidoreductase | SHEW_RS09715 | Not Available | Positive | 2163071 - 2164156 | 38041.5 |
| gnat family n-acetyltransferase | SHEW_RS09720 | Not Available | Positive | 2164309 - 2164740 | 15891.0 |
| hypothetical protein | SHEW_RS09725 | Not Available | Positive | 2164791 - 2165231 | 16098.4 |
| duf3465 domain-containing protein | SHEW_RS09730 | Not Available | Positive | 2165424 - 2165825 | 14793.8 |
| hd-gyp domain-containing protein | SHEW_RS09735 | Not Available | Negative | 2165827 - 2167113 | 47429.0 |
| hypothetical protein | SHEW_RS09740 | Not Available | Negative | 2167489 - 2167725 | 8873.45 |
| dead/deah box helicase | SHEW_RS09745 | Not Available | Positive | 2168190 - 2169656 | 53739.9 |
| duf2971 domain-containing protein | SHEW_RS20400 | Not Available | Positive | 2170419 - 2171285 | 33238.0 |
| alpha-amylase family protein | SHEW_RS09760 | Not Available | Negative | 2171509 - 2173512 | 73777.2 |
| glycoside hydrolase family 13 protein | SHEW_RS09765 | Not Available | Negative | 2173512 - 2175476 | 73642.9 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
