Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxy-tetrahydrodipicolinate synthase | SHEW_RS09565 | Not Available | Positive | 2123316 - 2124200 | 31103.6 |
| outer membrane protein assembly factor bamc | SHEW_RS09570 | Not Available | Positive | 2124205 - 2125326 | 42305.9 |
| eal domain-containing protein | SHEW_RS09575 | Not Available | Positive | 2125619 - 2127991 | 87396.7 |
| efflux rnd transporter periplasmic adaptor subunit | SHEW_RS09580 | Not Available | Positive | 2128155 - 2129240 | 39864.6 |
| efflux rnd transporter permease subunit | SHEW_RS09585 | Not Available | Positive | 2129237 - 2132365 | 114247.0 |
| hypothetical protein | SHEW_RS09590 | Not Available | Positive | 2132614 - 2132931 | 11564.9 |
| hypothetical protein | SHEW_RS09595 | Not Available | Positive | 2133350 - 2134720 | 50204.9 |
| duf2897 family protein | SHEW_RS09600 | Not Available | Negative | 2134825 - 2135091 | 9545.3 |
| 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase kdsb | SHEW_RS09605 | Not Available | Negative | 2135122 - 2135859 | 27428.8 |
| 3-deoxy-alpha-d-manno-octulosonate 8-oxidase kdnb | SHEW_RS09610 | Not Available | Negative | 2135944 - 2137014 | 39517.4 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
