Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-met | Not Available | Not Available | Positive | 2082688 - 2082764 | Not Available |
| bifunctional 23s rrna (guanine(2069)-n(7))-methyltransferase rlmk/23s rrna (guanine(2445)-n(2))-methyltransferase rlml | SHEW_RS09375 | Not Available | Positive | 2083035 - 2085170 | 79896.4 |
| glutaredoxin family protein | SHEW_RS09380 | Not Available | Positive | 2085163 - 2085399 | 8798.37 |
| abc transporter atp-binding protein | SHEW_RS09385 | Not Available | Positive | 2085401 - 2087320 | 71942.6 |
| duf3466 family protein | SHEW_RS09390 | Not Available | Positive | 2087345 - 2089198 | 68797.7 |
| ribosome modulation factor | SHEW_RS20395 | Not Available | Positive | 2089384 - 2089560 | 6572.77 |
| bifunctional 3-hydroxydecanoyl-acp dehydratase/trans-2-decenoyl-acp isomerase | SHEW_RS09395 | Not Available | Negative | 2089619 - 2090134 | 18777.7 |
| s16 family serine protease | SHEW_RS09400 | Not Available | Negative | 2090202 - 2091911 | 62413.1 |
| gntr family transcriptional regulator | SHEW_RS09405 | Not Available | Positive | 2092309 - 2092977 | 25193.2 |
| methylisocitrate lyase | SHEW_RS09410 | Not Available | Positive | 2092990 - 2093868 | 32011.2 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
