Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| slipin family protein | SHEW_RS09220 | Not Available | Negative | 2042287 - 2043090 | 30093.9 |
| nfed family protein | SHEW_RS09225 | Not Available | Negative | 2043100 - 2044602 | 51896.0 |
| molecular chaperone | SHEW_RS09230 | Not Available | Positive | 2044776 - 2046161 | 49529.2 |
| crea family protein | SHEW_RS09235 | Not Available | Positive | 2046229 - 2046726 | 17695.2 |
| cystathionine beta-lyase | SHEW_RS09240 | Not Available | Negative | 2046906 - 2048093 | 43380.9 |
| proteobacterial dedicated sortase system histidine kinase | SHEW_RS09245 | Not Available | Negative | 2048197 - 2050368 | 80897.5 |
| proteobacterial dedicated sortase system response regulator | SHEW_RS09250 | Not Available | Negative | 2050371 - 2051063 | 26308.4 |
| sortase-associated ompa-like protein pdso | SHEW_RS09255 | Not Available | Positive | 2051283 - 2052038 | 26817.6 |
| marine proteobacterial sortase target protein | SHEW_RS09260 | Not Available | Positive | 2052078 - 2054408 | 84815.7 |
| class gn sortase | SHEW_RS09265 | Not Available | Positive | 2054408 - 2055208 | 29533.1 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
