Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nickel-dependent hydrogenase small subunit | SHEW_RS09125 | Not Available | Negative | 2017409 - 2018545 | 40798.5 |
| cbs domain-containing protein | SHEW_RS09130 | Not Available | Positive | 2018888 - 2019304 | 15194.8 |
| atp-dependent rna helicase hrpa | SHEW_RS09135 | Not Available | Positive | 2019461 - 2023348 | 147201.0 |
| nitrate reductase | SHEW_RS20390 | Not Available | Positive | 2023767 - 2023925 | 5571.91 |
| chaperone napd | SHEW_RS09140 | Not Available | Positive | 2023965 - 2024222 | 9477.63 |
| nitrate reductase catalytic subunit napa | SHEW_RS09145 | Not Available | Positive | 2024225 - 2026714 | 92936.4 |
| nitrate reductase cytochrome c-type subunit | SHEW_RS09150 | Not Available | Positive | 2026726 - 2027205 | 17711.5 |
| cytochrome c3 family protein | SHEW_RS09155 | Not Available | Positive | 2027216 - 2027803 | 22220.5 |
| lysr family transcriptional regulator | SHEW_RS09160 | Not Available | Negative | 2027904 - 2028824 | 35504.0 |
| hypothetical protein | SHEW_RS09165 | Not Available | Positive | 2029126 - 2029623 | 17463.8 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
