Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase/urease nickel incorporation protein hypa | SHEW_RS09075 | Not Available | Negative | 2006591 - 2006941 | 13022.7 |
| hydrogenase expression/formation protein hype | SHEW_RS09080 | Not Available | Negative | 2006941 - 2007951 | 35782.1 |
| hydrogenase formation protein hypd | SHEW_RS09085 | Not Available | Negative | 2007954 - 2009069 | 40836.5 |
| hypc/hybg/hupf family hydrogenase formation chaperone | SHEW_RS09090 | Not Available | Negative | 2009066 - 2009314 | 9179.16 |
| hydrogenase nickel incorporation protein hypb | SHEW_RS09095 | Not Available | Negative | 2009317 - 2010150 | 31124.1 |
| carbamoyltransferase hypf | SHEW_RS09100 | Not Available | Negative | 2010302 - 2012671 | 86413.9 |
| hypothetical protein | SHEW_RS09105 | Not Available | Negative | 2012673 - 2014460 | 66518.0 |
| hyad/hybd family hydrogenase maturation endopeptidase | SHEW_RS09110 | Not Available | Negative | 2014441 - 2015004 | 20792.2 |
| ni/fe-hydrogenase, b-type cytochrome subunit | SHEW_RS09115 | Not Available | Negative | 2015016 - 2015687 | 25386.3 |
| nickel-dependent hydrogenase large subunit | SHEW_RS09120 | Not Available | Negative | 2015698 - 2017404 | 62411.9 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
