Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s9 family peptidase | SHEW_RS08675 | Not Available | Positive | 1924089 - 1926140 | 75848.1 |
| abc-f family atpase | SHEW_RS08680 | Not Available | Positive | 1926354 - 1927949 | 59899.4 |
| leucyl aminopeptidase family protein | SHEW_RS08685 | Not Available | Negative | 1928104 - 1929465 | 48983.6 |
| letm1 domain-containing protein | SHEW_RS08690 | Not Available | Negative | 1929538 - 1929966 | 16113.1 |
| tetr/acrr family transcriptional regulator | SHEW_RS08695 | Not Available | Negative | 1930027 - 1930584 | 20714.2 |
| hpp family protein | SHEW_RS08700 | Not Available | Positive | 1930713 - 1931183 | 16284.6 |
| sensor domain-containing diguanylate cyclase | SHEW_RS08705 | Not Available | Positive | 1931402 - 1932892 | 56235.6 |
| ribonuclease h family protein | SHEW_RS08710 | Not Available | Negative | 1932935 - 1933699 | 27665.6 |
| duf1415 domain-containing protein | SHEW_RS08715 | Not Available | Negative | 1933730 - 1934305 | 22074.9 |
| lyse family translocator | SHEW_RS08720 | Not Available | Negative | 1934337 - 1934933 | 21251.0 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
