Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-54 dependent transcriptional regulator | SHEW_RS08525 | Not Available | Negative | 1886174 - 1887544 | 51927.2 |
| mbl fold metallo-hydrolase | SHEW_RS08530 | Not Available | Negative | 1888021 - 1888899 | 31901.8 |
| efflux rnd transporter permease subunit | SHEW_RS08535 | Not Available | Negative | 1889011 - 1892058 | 112203.0 |
| efflux rnd transporter permease subunit | SHEW_RS08540 | Not Available | Negative | 1892055 - 1895303 | 118537.0 |
| efflux rnd transporter periplasmic adaptor subunit | SHEW_RS08545 | Not Available | Negative | 1895318 - 1896382 | 39437.1 |
| citrate synthase | SHEW_RS08550 | Not Available | Negative | 1897131 - 1898417 | 47891.6 |
| succinate dehydrogenase cytochrome b556 subunit | SHEW_RS08555 | Not Available | Positive | 1898830 - 1899225 | 14476.8 |
| succinate dehydrogenase, hydrophobic membrane anchor protein | SHEW_RS08560 | Not Available | Positive | 1899219 - 1899566 | 12390.6 |
| succinate dehydrogenase flavoprotein subunit | SHEW_RS08565 | Not Available | Positive | 1899567 - 1901333 | 64208.3 |
| succinate dehydrogenase iron-sulfur subunit | SHEW_RS08570 | Not Available | Positive | 1901344 - 1902051 | 26609.4 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
