Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diguanylate cyclase domain-containing protein | SHEW_RS08475 | Not Available | Negative | 1870343 - 1871698 | 51081.5 |
| duf2062 domain-containing protein | SHEW_RS08480 | Not Available | Negative | 1872031 - 1872537 | 19361.3 |
| dna internalization-related competence protein comec/rec2 | SHEW_RS08485 | Not Available | Positive | 1872581 - 1874854 | 84290.0 |
| lipid a export permease/atp-binding protein msba | SHEW_RS08490 | Not Available | Positive | 1874888 - 1876702 | 65785.9 |
| tetraacyldisaccharide 4'-kinase | SHEW_RS08495 | Not Available | Positive | 1876708 - 1877724 | 37315.2 |
| trm112 family protein | SHEW_RS08500 | Not Available | Positive | 1877726 - 1877905 | 6622.08 |
| serine/threonine protein kinase | SHEW_RS08505 | Not Available | Positive | 1878141 - 1878860 | 27091.6 |
| ig-like domain-containing protein | SHEW_RS08510 | Not Available | Positive | 1879360 - 1882428 | 105745.0 |
| hypothetical protein | SHEW_RS08515 | Not Available | Negative | 1882512 - 1884800 | 81000.1 |
| dsba family protein | SHEW_RS08520 | Not Available | Negative | 1885352 - 1886140 | 29219.2 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
