Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | SHEW_RS08375 | Not Available | Negative | 1846913 - 1847818 | 32563.4 |
| abc transporter permease subunit | SHEW_RS08380 | Not Available | Negative | 1847815 - 1848651 | 30475.2 |
| yceh family protein | SHEW_RS08385 | Not Available | Negative | 1848726 - 1849373 | 23890.7 |
| s1 rna-binding domain-containing protein | SHEW_RS08390 | Not Available | Negative | 1849473 - 1850306 | 31011.6 |
| biosynthetic arginine decarboxylase | SHEW_RS08395 | Not Available | Positive | 1850856 - 1852769 | 71017.6 |
| adenosylmethionine decarboxylase | SHEW_RS08400 | Not Available | Positive | 1853026 - 1853946 | 33778.3 |
| agmatinase | SHEW_RS08405 | Not Available | Positive | 1853975 - 1854898 | 33398.8 |
| pyridoxamine 5'-phosphate oxidase | SHEW_RS08410 | Not Available | Positive | 1854926 - 1855582 | 25052.8 |
| hypothetical protein | SHEW_RS08415 | Not Available | Negative | 1855648 - 1856424 | 28994.5 |
| hth-type transcriptional regulator cysb | SHEW_RS08420 | Not Available | Positive | 1856663 - 1857637 | 36256.7 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
