Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf481 domain-containing protein | SHEW_RS08230 | Not Available | Negative | 1815221 - 1816009 | 29895.9 |
| diacylglycerol kinase | SHEW_RS08235 | Not Available | Negative | 1816343 - 1816714 | 13741.5 |
| dna ligase | SHEW_RS08240 | Not Available | Positive | 1817076 - 1817888 | 30759.7 |
| low molecular weight protein-tyrosine-phosphatase | SHEW_RS08245 | Not Available | Positive | 1817918 - 1818382 | 16939.0 |
| ribosome biogenesis gtpase ylqf | SHEW_RS08250 | Not Available | Negative | 1818553 - 1819494 | 35044.7 |
| isopenicillin n synthase family dioxygenase | SHEW_RS08255 | Not Available | Negative | 1819603 - 1820442 | 31612.3 |
| bifunctional methionine sulfoxide reductase b/a protein | SHEW_RS08260 | Not Available | Positive | 1820734 - 1821651 | 34297.1 |
| sulp family inorganic anion transporter | SHEW_RS08265 | Not Available | Negative | 1821719 - 1823278 | 55652.1 |
| ribonuclease e | SHEW_RS08270 | Not Available | Negative | 1823406 - 1826792 | 124985.0 |
| 23s rrna pseudouridine(955/2504/2580) synthase rluc | SHEW_RS08275 | Not Available | Positive | 1827392 - 1828351 | 36313.6 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
