Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uridine kinase | SHEW_RS08180 | Not Available | Positive | 1806167 - 1806802 | 23830.0 |
| dctp deaminase | SHEW_RS08185 | Not Available | Positive | 1806830 - 1807414 | 21319.7 |
| aminodeoxychorismate lyase | SHEW_RS08190 | Not Available | Positive | 1807411 - 1808247 | 30469.1 |
| endolytic transglycosylase mltg | SHEW_RS08195 | Not Available | Positive | 1808244 - 1809251 | 38334.4 |
| dtmp kinase | SHEW_RS08200 | Not Available | Positive | 1809248 - 1809880 | 23128.8 |
| dna polymerase iii subunit delta' | SHEW_RS08205 | Not Available | Positive | 1809898 - 1810812 | 33330.6 |
| pilz domain-containing protein | SHEW_RS08210 | Not Available | Positive | 1810819 - 1811145 | 11890.4 |
| tatd family hydrolase | SHEW_RS08215 | Not Available | Positive | 1811190 - 1811978 | 29220.9 |
| 16s rrna (cytosine(1407)-c(5))-methyltransferase rsmf | SHEW_RS08220 | Not Available | Negative | 1812330 - 1813790 | 54054.9 |
| nucleoside recognition domain-containing protein | SHEW_RS08225 | Not Available | Positive | 1813879 - 1815105 | 43043.7 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
