Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent clp protease adapter clps | SHEW_RS08130 | Not Available | Positive | 1796187 - 1796495 | 11576.0 |
| atp-dependent clp protease atp-binding subunit clpa | SHEW_RS08135 | Not Available | Positive | 1796531 - 1798789 | 83324.7 |
| translation initiation factor if-1 | SHEW_RS08140 | Not Available | Negative | 1799009 - 1799227 | 8275.21 |
| arginyltransferase | SHEW_RS08145 | Not Available | Negative | 1799358 - 1800062 | 27257.8 |
| leucyl/phenylalanyl-trna--protein transferase | SHEW_RS08150 | Not Available | Negative | 1800052 - 1800762 | 26973.5 |
| glycine zipper 2tm domain-containing protein | SHEW_RS08155 | Not Available | Positive | 1800815 - 1801306 | 17696.4 |
| hypothetical protein | SHEW_RS08160 | Not Available | Negative | 1801435 - 1801794 | 12465.1 |
| nif3-like dinuclear metal center hexameric protein | SHEW_RS08165 | Not Available | Positive | 1802005 - 1802757 | 27539.6 |
| methionine--trna ligase | SHEW_RS08170 | Not Available | Negative | 1802861 - 1804882 | 75919.5 |
| iron-sulfur cluster carrier protein apbc | SHEW_RS08175 | Not Available | Positive | 1805042 - 1806154 | 38929.1 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
