Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type b chloramphenicol o-acetyltransferase | SHEW_RS07980 | Not Available | Positive | 1764380 - 1765006 | 23228.3 |
| hypothetical protein | SHEW_RS07985 | Not Available | Negative | 1765003 - 1765305 | 11744.4 |
| nad(p)/fad-dependent oxidoreductase | SHEW_RS07990 | Not Available | Positive | 1765328 - 1766617 | 47841.5 |
| ydch family protein | SHEW_RS07995 | Not Available | Positive | 1766794 - 1767039 | 9321.77 |
| lysr substrate-binding domain-containing protein | SHEW_RS08000 | Not Available | Negative | 1767142 - 1768011 | 32676.5 |
| s-(hydroxymethyl)glutathione dehydrogenase/class iii alcohol dehydrogenase | SHEW_RS08005 | Not Available | Positive | 1768212 - 1769342 | 40045.3 |
| s-formylglutathione hydrolase | SHEW_RS08010 | Not Available | Positive | 1769403 - 1770239 | 31456.3 |
| mfs transporter | SHEW_RS08015 | Not Available | Negative | 1770262 - 1771800 | 56490.3 |
| hlyd family secretion protein | SHEW_RS08020 | Not Available | Negative | 1771815 - 1772861 | 38240.2 |
| tetr/acrr family transcriptional regulator | SHEW_RS08025 | Not Available | Positive | 1772981 - 1773580 | 22845.7 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
