Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2fe-2s iron-sulfur cluster-binding protein | SHEW_RS07780 | Not Available | Positive | 1726005 - 1726997 | 37505.5 |
| gnat family n-acetyltransferase | SHEW_RS07785 | Not Available | Positive | 1727129 - 1727560 | 16325.4 |
| hypothetical protein | SHEW_RS07790 | Not Available | Positive | 1727632 - 1728336 | 25611.5 |
| voc family protein | SHEW_RS07795 | Not Available | Positive | 1728569 - 1728919 | 12736.0 |
| 5-carboxymethyl-2-hydroxymuconate delta-isomerase | SHEW_RS07800 | Not Available | Positive | 1728922 - 1729269 | 12960.6 |
| substrate-binding periplasmic protein | SHEW_RS20095 | Not Available | Positive | 1729343 - 1730116 | 29265.2 |
| asparagine synthase b | SHEW_RS07810 | Not Available | Negative | 1730192 - 1731850 | 61803.3 |
| m28 family metallopeptidase | SHEW_RS07815 | Not Available | Negative | 1732190 - 1733851 | 60042.9 |
| had-iia family hydrolase | SHEW_RS07820 | Not Available | Negative | 1734073 - 1734819 | 26942.2 |
| phosphoribosylglycinamide formyltransferase | SHEW_RS07825 | Not Available | Negative | 1735092 - 1735736 | 23628.0 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
