Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1365 domain-containing protein | SHEW_RS07680 | Not Available | Positive | 1707937 - 1708740 | 30626.9 |
| sam-dependent methyltransferase | SHEW_RS07685 | Not Available | Positive | 1708852 - 1710132 | 48636.6 |
| duf2878 domain-containing protein | SHEW_RS07690 | Not Available | Positive | 1710110 - 1710619 | 18292.2 |
| chalcone isomerase family protein | SHEW_RS07695 | Not Available | Positive | 1710668 - 1711156 | 18764.1 |
| duf3833 domain-containing protein | SHEW_RS07700 | Not Available | Positive | 1711153 - 1711686 | 20211.2 |
| fad-binding oxidoreductase | SHEW_RS07705 | Not Available | Positive | 1711941 - 1713326 | 50057.5 |
| voc family protein | SHEW_RS07710 | Not Available | Negative | 1713445 - 1714035 | 21723.2 |
| l,d-transpeptidase family protein | SHEW_RS07715 | Not Available | Negative | 1714110 - 1714649 | 19959.0 |
| ion transporter | SHEW_RS07720 | Not Available | Positive | 1714795 - 1715622 | 31118.5 |
| mate family efflux transporter | SHEW_RS07725 | Not Available | Positive | 1715681 - 1717168 | 51881.4 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
