Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf6942 family protein | SHEW_RS07580 | Not Available | Negative | 1687270 - 1687776 | 18875.6 |
| alpha/beta hydrolase | SHEW_RS07585 | Not Available | Positive | 1687890 - 1689467 | 58634.9 |
| diguanylate cyclase | SHEW_RS07590 | Not Available | Negative | 1689626 - 1691794 | 81749.1 |
| duf4124 domain-containing protein | SHEW_RS20935 | Not Available | Positive | 1692232 - 1692660 | 16031.0 |
| hypothetical protein | SHEW_RS07600 | Not Available | Positive | 1692664 - 1693248 | 22412.5 |
| antiviral reverse transcriptase drt4 | SHEW_RS07605 | Not Available | Positive | 1693317 - 1694948 | 62993.5 |
| Trna-pro | Not Available | Not Available | Positive | 1695147 - 1695223 | Not Available |
| duf3413 domain-containing protein | SHEW_RS07615 | Not Available | Negative | 1695404 - 1697191 | 67460.0 |
| yejl family protein | SHEW_RS07620 | Not Available | Negative | 1697292 - 1697507 | 7695.38 |
| nucleoid-associated protein yejk | SHEW_RS07625 | Not Available | Positive | 1697585 - 1698616 | 37979.6 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
