Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | SHEW_RS07380 | Not Available | Negative | 1654969 - 1655859 | 33501.8 |
| mfs transporter | SHEW_RS07385 | Not Available | Positive | 1656060 - 1657277 | 44139.5 |
| sigma-54-dependent transcriptional regulator | SHEW_RS07390 | Not Available | Negative | 1657319 - 1658686 | 50992.7 |
| sensor histidine kinase | SHEW_RS07395 | Not Available | Negative | 1658689 - 1660512 | 68134.0 |
| trap transporter large permease | SHEW_RS07400 | Not Available | Negative | 1660596 - 1661993 | 49560.2 |
| trap transporter small permease | SHEW_RS07405 | Not Available | Negative | 1661993 - 1662631 | 23917.5 |
| trap transporter substrate-binding protein | SHEW_RS07410 | Not Available | Negative | 1662719 - 1663684 | 35826.8 |
| mfs transporter | SHEW_RS07415 | Not Available | Negative | 1663993 - 1665225 | 44359.1 |
| hypothetical protein | SHEW_RS07420 | Not Available | Negative | 1665367 - 1665594 | 8392.17 |
| Trna-val | Not Available | Not Available | Positive | 1665747 - 1665822 | Not Available |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
