Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| wzz/fepe/etk n-terminal domain-containing protein | SHEW_RS07185 | Not Available | Positive | 1612600 - 1613574 | 36042.8 |
| dtdp-glucose 4,6-dehydratase | SHEW_RS07190 | Not Available | Positive | 1613792 - 1614889 | 41358.4 |
| glucose-1-phosphate thymidylyltransferase rfba | SHEW_RS07195 | Not Available | Positive | 1614889 - 1615764 | 32624.8 |
| dtdp-4-dehydrorhamnose reductase | SHEW_RS07200 | Not Available | Positive | 1615774 - 1616640 | 31524.4 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | SHEW_RS07205 | Not Available | Positive | 1616643 - 1617188 | 21082.9 |
| duf1972 domain-containing protein | SHEW_RS07210 | Not Available | Positive | 1617188 - 1618246 | 40033.0 |
| lipopolysaccharide biosynthesis protein | SHEW_RS07215 | Not Available | Positive | 1618274 - 1619782 | 56840.8 |
| sdr family nad(p)-dependent oxidoreductase | SHEW_RS07220 | Not Available | Positive | 1619797 - 1620663 | 31169.1 |
| thiamine pyrophosphate-binding protein | SHEW_RS07225 | Not Available | Positive | 1620698 - 1622437 | 64931.3 |
| polysaccharide pyruvyl transferase family protein | SHEW_RS07230 | Not Available | Positive | 1622440 - 1623570 | 42745.6 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
