Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chemotaxis protein chew | SHEW_RS07135 | Not Available | Positive | 1599526 - 1600515 | 35870.9 |
| chemotaxis protein chew | SHEW_RS07140 | Not Available | Positive | 1600523 - 1601017 | 18053.5 |
| duf2802 domain-containing protein | SHEW_RS07145 | Not Available | Positive | 1601152 - 1601556 | 15200.7 |
| escu/yscu/hrcu family type iii secretion system export apparatus switch protein | SHEW_RS07150 | Not Available | Negative | 1601587 - 1601943 | 13449.2 |
| hypothetical protein | SHEW_RS07155 | Not Available | Negative | 1601943 - 1604096 | 76406.6 |
| vacj family lipoprotein | SHEW_RS07160 | Not Available | Positive | 1604335 - 1605066 | 27875.5 |
| response regulator | SHEW_RS07165 | Not Available | Positive | 1605197 - 1606300 | 41176.4 |
| peptide mfs transporter | SHEW_RS07170 | Not Available | Negative | 1606406 - 1607875 | 53195.5 |
| transcription/translation regulatory transformer protein rfah | SHEW_RS07175 | Not Available | Positive | 1608453 - 1608980 | 19899.3 |
| slbb domain-containing protein | SHEW_RS07180 | Not Available | Positive | 1609752 - 1612514 | 100635.0 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
