Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SHEW_RS06985 | Not Available | Positive | 1569434 - 1569754 | 12217.7 |
| flagellar export chaperone flis | SHEW_RS06990 | Not Available | Positive | 1569761 - 1570171 | 15233.1 |
| sigma-54 dependent transcriptional regulator | SHEW_RS06995 | Not Available | Positive | 1570438 - 1571871 | 53617.7 |
| sensor histidine kinase | SHEW_RS07000 | Not Available | Positive | 1572093 - 1573115 | 36519.3 |
| sigma-54-dependent transcriptional regulator | SHEW_RS07005 | Not Available | Positive | 1573108 - 1574451 | 49066.6 |
| flagellar hook-basal body complex protein flie | SHEW_RS07010 | Not Available | Positive | 1574648 - 1574980 | 11731.0 |
| flagellar basal-body ms-ring/collar protein flif | SHEW_RS07015 | Not Available | Positive | 1575039 - 1576736 | 61974.0 |
| flagellar motor switch protein flig | SHEW_RS07020 | Not Available | Positive | 1576729 - 1577772 | 38028.9 |
| flagellar assembly protein flih | SHEW_RS07025 | Not Available | Positive | 1577772 - 1578791 | 37190.6 |
| flagellar protein export atpase flii | SHEW_RS07030 | Not Available | Positive | 1578763 - 1580103 | 47525.9 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
