Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein assembly factor bamb | SHEW_RS06645 | Not Available | Positive | 1493389 - 1494576 | 42674.4 |
| ribosome biogenesis gtpase der | SHEW_RS06650 | Not Available | Positive | 1494671 - 1496140 | 54625.5 |
| hypothetical protein | SHEW_RS06655 | Not Available | Positive | 1496331 - 1496864 | 19138.1 |
| exodeoxyribonuclease vii large subunit | SHEW_RS06660 | Not Available | Negative | 1497096 - 1498424 | 49222.0 |
| imp dehydrogenase | SHEW_RS06665 | Not Available | Positive | 1498544 - 1500010 | 52082.9 |
| glutamine-hydrolyzing gmp synthase | SHEW_RS06670 | Not Available | Positive | 1500113 - 1501690 | 58140.6 |
| trna adenosine(34) deaminase tada | SHEW_RS06675 | Not Available | Positive | 1501837 - 1502373 | 19318.3 |
| hypothetical protein | SHEW_RS20820 | Not Available | Negative | 1502419 - 1502556 | 5439.72 |
| membrane-bound lytic murein transglycosylase mltf | SHEW_RS06685 | Not Available | Negative | 1502607 - 1504037 | 54602.8 |
| phosphoribosylformylglycinamidine synthase | SHEW_RS06690 | Not Available | Positive | 1504363 - 1508244 | 140443.0 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
