Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SHEW_RS06505 | Not Available | Negative | 1464090 - 1464605 | 19272.4 |
| helix-turn-helix domain-containing protein | SHEW_RS06510 | Not Available | Positive | 1464640 - 1465020 | 13272.9 |
| hypothetical protein | SHEW_RS21000 | Not Available | Negative | 1465276 - 1465410 | 4893.38 |
| integrase domain-containing protein | SHEW_RS06515 | Not Available | Negative | 1465559 - 1466788 | 46217.1 |
| Tmrna,resume consensus sequence (at 84): tatagttgcaaacgacga | Not Available | Not Available | Positive | 1466990 - 1467345 | Not Available |
| ssra-binding protein smpb | SHEW_RS06520 | Not Available | Negative | 1467468 - 1467959 | 18962.0 |
| srpbcc family protein | SHEW_RS06525 | Not Available | Positive | 1468162 - 1468593 | 16050.5 |
| rnfh family protein | SHEW_RS06530 | Not Available | Positive | 1468622 - 1468954 | 12361.9 |
| outer membrane protein assembly factor bame | SHEW_RS06535 | Not Available | Negative | 1469162 - 1469662 | 18925.4 |
| sam-dependent methyltransferase | SHEW_RS06540 | Not Available | Positive | 1470059 - 1470868 | 29723.9 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
