Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane beta-barrel protein | SHEW_RS06365 | Not Available | Positive | 1435986 - 1436885 | 33608.5 |
| osmc family protein | SHEW_RS06370 | Not Available | Negative | 1436953 - 1437471 | 18699.3 |
| hypothetical protein | SHEW_RS06375 | Not Available | Negative | 1437563 - 1437841 | 10228.9 |
| duf3325 domain-containing protein | SHEW_RS06380 | Not Available | Negative | 1437952 - 1438314 | 12860.4 |
| pepsy-associated tm helix domain-containing protein | SHEW_RS06385 | Not Available | Negative | 1438311 - 1440023 | 63967.7 |
| hypothetical protein | SHEW_RS06390 | Not Available | Negative | 1440028 - 1440267 | 8492.16 |
| ribosome hibernation-promoting factor, hpf/yfia family | SHEW_RS06395 | Not Available | Positive | 1440748 - 1441104 | 13119.8 |
| hypothetical protein | SHEW_RS06400 | Not Available | Negative | 1441257 - 1441673 | 15410.2 |
| m35 family metallo-endopeptidase | SHEW_RS06405 | Not Available | Negative | 1441813 - 1442898 | 38909.1 |
| organic hydroperoxide resistance protein | SHEW_RS06410 | Not Available | Positive | 1443417 - 1443851 | 14929.6 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
