Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yqaa family protein | SHEW_RS06315 | Not Available | Positive | 1422926 - 1423348 | 15296.2 |
| m16 family metallopeptidase | SHEW_RS06320 | Not Available | Positive | 1423434 - 1426268 | 104149.0 |
| glutamate--cysteine ligase | SHEW_RS06325 | Not Available | Positive | 1426449 - 1428038 | 58569.5 |
| hypothetical protein | SHEW_RS06330 | Not Available | Positive | 1428041 - 1428481 | 16271.3 |
| hypothetical protein | SHEW_RS06335 | Not Available | Positive | 1428580 - 1429197 | 23866.0 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | SHEW_RS06340 | Not Available | Positive | 1429520 - 1430029 | 17177.8 |
| sigma-70 family rna polymerase sigma factor | SHEW_RS06345 | Not Available | Positive | 1430509 - 1431057 | 20193.1 |
| hypothetical protein | SHEW_RS20085 | Not Available | Positive | 1431057 - 1431824 | 27917.9 |
| hypothetical protein | SHEW_RS06355 | Not Available | Negative | 1431875 - 1432318 | 16586.3 |
| s41 family peptidase | SHEW_RS06360 | Not Available | Positive | 1432466 - 1435780 | 122622.0 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
