Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein-l-isoaspartate(d-aspartate) o-methyltransferase | SHEW_RS06220 | Not Available | Positive | 1405114 - 1405749 | 22855.9 |
| peptidoglycan dd-metalloendopeptidase family protein | SHEW_RS06225 | Not Available | Positive | 1405799 - 1406731 | 33831.8 |
| rna polymerase sigma factor rpos | SHEW_RS06230 | Not Available | Positive | 1406809 - 1407783 | 36939.2 |
| dna mismatch repair protein muts | SHEW_RS06235 | Not Available | Negative | 1408043 - 1410610 | 95581.3 |
| recombinase reca | SHEW_RS06240 | Not Available | Positive | 1410941 - 1412002 | 37701.5 |
| recombination regulator recx | SHEW_RS06245 | Not Available | Positive | 1412082 - 1412534 | 16887.1 |
| alanine--trna ligase | SHEW_RS06250 | Not Available | Positive | 1412779 - 1415403 | 95073.9 |
| carbon storage regulator csra | SHEW_RS20330 | Not Available | Positive | 1415710 - 1415907 | 7101.55 |
| Trna-ser | Not Available | Not Available | Positive | 1416121 - 1416212 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 1416234 - 1416310 | Not Available |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
