Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pepsy-associated tm helix domain-containing protein | SHEW_RS06075 | Not Available | Negative | 1370809 - 1371939 | 42471.6 |
| metallophosphoesterase | SHEW_RS06080 | Not Available | Negative | 1372354 - 1373472 | 42036.4 |
| energy-dependent translational throttle protein etta | SHEW_RS06085 | Not Available | Negative | 1373686 - 1375350 | 62082.8 |
| duf3943 domain-containing protein | SHEW_RS06090 | Not Available | Positive | 1375662 - 1377287 | 60551.4 |
| serine hydroxymethyltransferase | SHEW_RS06095 | Not Available | Positive | 1377630 - 1378883 | 45455.2 |
| transcriptional regulator nrdr | SHEW_RS06100 | Not Available | Positive | 1379008 - 1379481 | 17825.5 |
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | SHEW_RS06105 | Not Available | Positive | 1379520 - 1380680 | 41487.2 |
| riboflavin synthase | SHEW_RS06110 | Not Available | Positive | 1380687 - 1381352 | 23887.6 |
| bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/gtp cyclohydrolase ii | SHEW_RS06115 | Not Available | Positive | 1381435 - 1382538 | 40262.2 |
| 6,7-dimethyl-8-ribityllumazine synthase | SHEW_RS06120 | Not Available | Positive | 1382662 - 1383138 | 16621.1 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
