Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycogen synthase | SHEW_RS06030 | Not Available | Positive | 1354568 - 1356217 | 60177.8 |
| nyn domain-containing protein | SHEW_RS06035 | Not Available | Negative | 1356261 - 1356734 | 17794.2 |
| tetratricopeptide repeat-containing sulfotransferase family protein | SHEW_RS06040 | Not Available | Positive | 1356928 - 1358523 | 59853.2 |
| aspartyl/asparaginyl beta-hydroxylase domain-containing protein | SHEW_RS06045 | Not Available | Negative | 1358695 - 1359846 | 42790.9 |
| sulfotransferase | SHEW_RS06050 | Not Available | Negative | 1359863 - 1360942 | 40146.8 |
| efflux rnd transporter periplasmic adaptor subunit | SHEW_RS06055 | Not Available | Positive | 1361267 - 1362520 | 44880.7 |
| multidrug efflux rnd transporter permease subunit | SHEW_RS06060 | Not Available | Positive | 1362520 - 1365648 | 112617.0 |
| hypothetical protein | SHEW_RS20815 | Not Available | Negative | 1366259 - 1366408 | 5708.83 |
| pilc/pily family type iv pilus protein | SHEW_RS06065 | Not Available | Positive | 1366722 - 1370291 | 128970.0 |
| tapy2 family type iva secretion system protein | SHEW_RS06070 | Not Available | Positive | 1370373 - 1370684 | 11704.4 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
