Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SHEW_RS05980 | Not Available | Negative | 1335899 - 1336273 | 14375.8 |
| efflux rnd transporter periplasmic adaptor subunit | SHEW_RS05985 | Not Available | Positive | 1336740 - 1337897 | 41861.6 |
| efflux rnd transporter permease subunit | SHEW_RS05990 | Not Available | Positive | 1337910 - 1341032 | 112090.0 |
| cold-shock protein | SHEW_RS05995 | Not Available | Negative | 1341110 - 1341319 | 7437.68 |
| l-threonine dehydrogenase | SHEW_RS06000 | Not Available | Negative | 1342277 - 1343425 | 39868.2 |
| 4-alpha-glucanotransferase | SHEW_RS06005 | Not Available | Positive | 1343941 - 1346178 | 83583.4 |
| 1,4-alpha-glucan branching protein glgb | SHEW_RS06010 | Not Available | Positive | 1346226 - 1348523 | 87296.3 |
| glycogen debranching protein glgx | SHEW_RS06015 | Not Available | Positive | 1348514 - 1350715 | 82732.0 |
| glycogen/starch/alpha-glucan phosphorylase | SHEW_RS06020 | Not Available | Positive | 1350712 - 1353222 | 94812.1 |
| glucose-1-phosphate adenylyltransferase | SHEW_RS06025 | Not Available | Positive | 1353301 - 1354575 | 47694.9 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
