Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna-binding domain-containing protein | SHEW_RS05885 | Not Available | Positive | 1317630 - 1319018 | 52218.0 |
| holliday junction resolvase ruvx | SHEW_RS05890 | Not Available | Negative | 1320077 - 1320496 | 15165.2 |
| yqge/algh family protein | SHEW_RS05895 | Not Available | Negative | 1320518 - 1321075 | 20808.6 |
| stress response translation initiation inhibitor ycih | SHEW_RS05900 | Not Available | Negative | 1321092 - 1321421 | 11904.5 |
| hypothetical protein | SHEW_RS05905 | Not Available | Negative | 1321638 - 1321952 | 11278.3 |
| duf4136 domain-containing protein | SHEW_RS05910 | Not Available | Positive | 1322126 - 1322689 | 21065.0 |
| duf924 family protein | SHEW_RS05915 | Not Available | Positive | 1322950 - 1323399 | 17059.3 |
| lysr family transcriptional regulator | SHEW_RS05920 | Not Available | Negative | 1323548 - 1324423 | 32585.2 |
| pace efflux transporter | SHEW_RS05925 | Not Available | Positive | 1324509 - 1324931 | 16035.7 |
| ompa family protein | SHEW_RS05930 | Not Available | Positive | 1325148 - 1325852 | 25364.3 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
