Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rdgb/ham1 family non-canonical purine ntp pyrophosphatase | SHEW_RS05835 | Not Available | Negative | 1308471 - 1309070 | 21379.3 |
| duf4426 domain-containing protein | SHEW_RS05840 | Not Available | Negative | 1309212 - 1309646 | 15993.2 |
| duf167 family protein yggu | SHEW_RS05845 | Not Available | Negative | 1309733 - 1310023 | 10575.2 |
| yggt family protein | SHEW_RS05850 | Not Available | Negative | 1310024 - 1310572 | 20249.1 |
| pyrroline-5-carboxylate reductase | SHEW_RS05855 | Not Available | Negative | 1310633 - 1311451 | 29487.7 |
| yggs family pyridoxal phosphate-dependent enzyme | SHEW_RS05860 | Not Available | Negative | 1311533 - 1312234 | 25713.5 |
| type iv pilus twitching motility protein pilt | SHEW_RS05865 | Not Available | Positive | 1312270 - 1313307 | 38274.2 |
| pilt/pilu family type 4a pilus atpase | SHEW_RS05870 | Not Available | Positive | 1313320 - 1314432 | 41145.7 |
| ferrochelatase | SHEW_RS05875 | Not Available | Positive | 1314613 - 1315626 | 38002.6 |
| is110-like element isslo1 family transposase | SHEW_RS05880 | Not Available | Negative | 1316043 - 1317056 | 37938.3 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
