Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oxidative damage protection protein | SHEW_RS05785 | Not Available | Negative | 1297772 - 1298050 | 10868.0 |
| a/g-specific adenine glycosylase | SHEW_RS05790 | Not Available | Negative | 1298053 - 1299111 | 39580.5 |
| trna (guanosine(46)-n7)-methyltransferase trmb | SHEW_RS05795 | Not Available | Positive | 1299395 - 1300111 | 26917.3 |
| yggl family protein | SHEW_RS05800 | Not Available | Positive | 1300142 - 1300465 | 12595.7 |
| glutaminase b | SHEW_RS05805 | Not Available | Positive | 1300465 - 1301379 | 32876.8 |
| yggn family protein | SHEW_RS05810 | Not Available | Positive | 1301679 - 1302509 | 30379.9 |
| lysr family transcriptional regulator | SHEW_RS05815 | Not Available | Positive | 1302855 - 1303796 | 34799.0 |
| hypothetical protein | SHEW_RS05820 | Not Available | Positive | 1304546 - 1305220 | 24831.5 |
| duf885 domain-containing protein | SHEW_RS05825 | Not Available | Negative | 1305355 - 1307196 | 69683.5 |
| radical sam family heme chaperone hemw | SHEW_RS05830 | Not Available | Negative | 1307332 - 1308471 | 42568.5 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
