Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pilus assembly pilx n-terminal domain-containing protein | SHEW_RS05690 | Not Available | Positive | 1273540 - 1273974 | 14946.0 |
| pilus assembly protein | SHEW_RS05695 | Not Available | Positive | 1273979 - 1277527 | 127956.0 |
| type iv pilin protein | SHEW_RS05700 | Not Available | Positive | 1277531 - 1277923 | 13922.7 |
| tapy2 family type iva secretion system protein | SHEW_RS05705 | Not Available | Positive | 1277920 - 1278219 | 11134.8 |
| gsph/fimt family pseudopilin | SHEW_RS20320 | Not Available | Negative | 1278259 - 1278750 | 16960.2 |
| gsph/fimt family pseudopilin | SHEW_RS05710 | Not Available | Negative | 1278887 - 1279399 | 18610.1 |
| p-ii family nitrogen regulator | SHEW_RS05715 | Not Available | Positive | 1279650 - 1279988 | 12607.3 |
| laci family dna-binding transcriptional regulator | SHEW_RS05720 | Not Available | Negative | 1280073 - 1281092 | 36663.5 |
| tonb-dependent receptor | SHEW_RS05725 | Not Available | Positive | 1281505 - 1284129 | 94701.2 |
| tryptophan halogenase family protein | SHEW_RS05730 | Not Available | Positive | 1284252 - 1285778 | 57845.1 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
