Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arsr/smtb family transcription factor | SHEW_RS05640 | Not Available | Positive | 1263446 - 1263742 | 11287.0 |
| 30s ribosomal protein s20 | SHEW_RS05645 | Not Available | Negative | 1263964 - 1264230 | 9716.93 |
| murein biosynthesis integral membrane protein murj | SHEW_RS05650 | Not Available | Positive | 1264478 - 1266037 | 56692.4 |
| bifunctional riboflavin kinase/fad synthetase | SHEW_RS05655 | Not Available | Positive | 1266103 - 1267038 | 34303.8 |
| isoleucine--trna ligase | SHEW_RS05660 | Not Available | Positive | 1267071 - 1269893 | 105590.0 |
| signal peptidase ii | SHEW_RS05665 | Not Available | Positive | 1269903 - 1270415 | 19361.4 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | SHEW_RS05670 | Not Available | Positive | 1270419 - 1270841 | 14788.5 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | SHEW_RS05675 | Not Available | Positive | 1270865 - 1271794 | 33770.3 |
| type iv pilus modification protein pilv | SHEW_RS05680 | Not Available | Positive | 1272026 - 1272547 | 18357.0 |
| pilw family protein | SHEW_RS05685 | Not Available | Positive | 1272548 - 1273534 | 36140.2 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
