Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator transcription factor | SHEW_RS05590 | Not Available | Positive | 1250067 - 1251161 | 41451.8 |
| hemerythrin domain-containing protein | SHEW_RS05595 | Not Available | Positive | 1251288 - 1251830 | 21095.9 |
| duf3545 family protein | SHEW_RS05600 | Not Available | Negative | 1251895 - 1252086 | 7559.92 |
| glucose-6-phosphate isomerase | SHEW_RS05605 | Not Available | Negative | 1252316 - 1253953 | 60070.7 |
| transaldolase | SHEW_RS05610 | Not Available | Negative | 1253967 - 1254923 | 34864.7 |
| ompa family protein | SHEW_RS05615 | Not Available | Negative | 1255197 - 1256300 | 40517.2 |
| phosphoketolase family protein | SHEW_RS05620 | Not Available | Negative | 1256548 - 1258914 | 89231.2 |
| alanine/glycine:cation symporter family protein | SHEW_RS05625 | Not Available | Positive | 1259341 - 1260819 | 51769.1 |
| peroxide stress protein yaaa | SHEW_RS05630 | Not Available | Positive | 1260947 - 1261723 | 29115.9 |
| m28 family peptidase | SHEW_RS05635 | Not Available | Negative | 1261904 - 1263310 | 49587.0 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
