Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c | SHEW_RS05540 | Not Available | Negative | 1238761 - 1239210 | 15832.8 |
| trp operon repressor | SHEW_RS05545 | Not Available | Positive | 1239453 - 1239728 | 10485.8 |
| hypothetical protein | SHEW_RS05550 | Not Available | Negative | 1239804 - 1240235 | 16445.7 |
| peptidylprolyl isomerase | SHEW_RS05555 | Not Available | Negative | 1240366 - 1240980 | 21627.1 |
| bifunctional aspartate kinase/homoserine dehydrogenase i | SHEW_RS05560 | Not Available | Positive | 1241698 - 1244166 | 88926.6 |
| homoserine kinase | SHEW_RS05565 | Not Available | Positive | 1244163 - 1245113 | 33549.0 |
| threonine synthase | SHEW_RS05570 | Not Available | Positive | 1245127 - 1246410 | 46487.7 |
| hypothetical protein | SHEW_RS05575 | Not Available | Positive | 1246769 - 1247065 | 10985.2 |
| deoxyribonuclease iv | SHEW_RS05580 | Not Available | Negative | 1247062 - 1247913 | 31336.1 |
| atp-binding protein | SHEW_RS05585 | Not Available | Positive | 1248046 - 1250070 | 75574.3 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
