Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gtpase era | SHEW_RS05440 | Not Available | Positive | 1217607 - 1218602 | 37506.2 |
| dna repair protein reco | SHEW_RS05445 | Not Available | Positive | 1218707 - 1219402 | 25751.2 |
| pyridoxine 5'-phosphate synthase | SHEW_RS05450 | Not Available | Positive | 1219531 - 1220268 | 26617.0 |
| holo-acp synthase | SHEW_RS05455 | Not Available | Positive | 1220313 - 1220714 | 13712.6 |
| duf962 domain-containing protein | SHEW_RS05460 | Not Available | Positive | 1220981 - 1221523 | 20336.3 |
| hlyc/corc family transporter | SHEW_RS05465 | Not Available | Negative | 1221590 - 1222873 | 47635.4 |
| inner membrane protein ypjd | SHEW_RS05470 | Not Available | Negative | 1223020 - 1223808 | 28807.5 |
| signal recognition particle protein | SHEW_RS05475 | Not Available | Positive | 1224101 - 1225474 | 49781.4 |
| 30s ribosomal protein s16 | SHEW_RS05480 | Not Available | Positive | 1225680 - 1225931 | 9251.13 |
| ribosome maturation factor rimm | SHEW_RS05485 | Not Available | Positive | 1225952 - 1226482 | 19914.8 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
