Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinate dehydrogenase assembly factor 2 | SHEW_RS05390 | Not Available | Positive | 1208763 - 1209002 | 9170.16 |
| protein ygfx | SHEW_RS05395 | Not Available | Positive | 1208983 - 1209438 | 18095.2 |
| l-aspartate oxidase | SHEW_RS05400 | Not Available | Negative | 1209447 - 1211060 | 59851.1 |
| rna polymerase sigma factor rpoe | SHEW_RS05405 | Not Available | Positive | 1211260 - 1211838 | 21904.1 |
| sigma-e factor negative regulatory protein | SHEW_RS05410 | Not Available | Positive | 1211878 - 1212480 | 21942.9 |
| mucb/rseb c-terminal domain-containing protein | SHEW_RS05415 | Not Available | Positive | 1212546 - 1213478 | 34892.2 |
| soxr reducing system rsec family protein | SHEW_RS05420 | Not Available | Positive | 1213486 - 1213962 | 16768.4 |
| translation elongation factor 4 | SHEW_RS05425 | Not Available | Positive | 1214071 - 1215861 | 65779.3 |
| signal peptidase i | SHEW_RS05430 | Not Available | Positive | 1216015 - 1216932 | 34475.7 |
| ribonuclease iii | SHEW_RS05435 | Not Available | Positive | 1216933 - 1217610 | 25128.7 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
