Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogen peroxide-inducible genes transcriptional activator oxyr | SHEW_RS05340 | Not Available | Positive | 1197527 - 1198444 | 33990.0 |
| adenylate/guanylate cyclase domain-containing protein | SHEW_RS05345 | Not Available | Negative | 1198447 - 1199526 | 40848.8 |
| dna mismatch repair endonuclease muth | SHEW_RS05350 | Not Available | Negative | 1199866 - 1200537 | 25239.8 |
| rna pyrophosphohydrolase | SHEW_RS05355 | Not Available | Positive | 1201232 - 1201756 | 20610.6 |
| phosphoenolpyruvate--protein phosphotransferase | SHEW_RS05360 | Not Available | Positive | 1201791 - 1204022 | 82197.9 |
| sulfite exporter taue/safe family protein | SHEW_RS05365 | Not Available | Positive | 1204127 - 1204921 | 27640.2 |
| thymidylate synthase | SHEW_RS05370 | Not Available | Positive | 1205044 - 1205895 | 32201.3 |
| na+/h+ antiporter nhaa | SHEW_RS05375 | Not Available | Positive | 1206202 - 1207377 | 41247.9 |
| hypothetical protein | SHEW_RS05380 | Not Available | Positive | 1207374 - 1207757 | 14176.1 |
| transcriptional activator nhar | SHEW_RS05385 | Not Available | Positive | 1207778 - 1208686 | 34206.4 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
