Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chloride channel protein | SHEW_RS05240 | Not Available | Negative | 1174427 - 1176136 | 61983.8 |
| duf6776 family protein | SHEW_RS05245 | Not Available | Positive | 1176212 - 1177129 | 34107.3 |
| iron-sulfur cluster insertion protein erpa | SHEW_RS05250 | Not Available | Positive | 1177122 - 1177472 | 12555.7 |
| hypothetical protein | SHEW_RS05255 | Not Available | Negative | 1177601 - 1178074 | 17191.9 |
| duf2750 domain-containing protein | SHEW_RS05260 | Not Available | Negative | 1178135 - 1178506 | 14155.7 |
| anhydro-n-acetylmuramic acid kinase | SHEW_RS05265 | Not Available | Negative | 1178664 - 1179773 | 39759.5 |
| peptidoglycan dd-metalloendopeptidase family protein | SHEW_RS05270 | Not Available | Negative | 1179811 - 1181286 | 54349.7 |
| tyrosine--trna ligase | SHEW_RS05275 | Not Available | Positive | 1181413 - 1182609 | 43897.1 |
| nuclear transport factor 2 family protein | SHEW_RS05280 | Not Available | Negative | 1182756 - 1183235 | 18161.9 |
| trimeric intracellular cation channel family protein | SHEW_RS05285 | Not Available | Negative | 1183237 - 1183857 | 22077.0 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
