Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella loihica |
| Strain | PV-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 16 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1065761 bp
Thymine Count
1066759 bp
Guanine Count
1233876 bp
Cytosine Count
1236198 bp
Genome Length
4602594 bp
Protein-coding Genes
3913 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative rna methyltransferase | SHEW_RS05190 | Not Available | Positive | 1162084 - 1162908 | 30481.6 |
| l,d-transpeptidase family protein | SHEW_RS05195 | Not Available | Positive | 1163002 - 1163943 | 34570.2 |
| lpp/opri family alanine-zipper lipoprotein | SHEW_RS05200 | Not Available | Negative | 1164241 - 1164507 | 9068.83 |
| multifunctional cca addition/repair protein | SHEW_RS05205 | Not Available | Negative | 1164717 - 1165958 | 46664.5 |
| exea family protein | SHEW_RS05210 | Not Available | Positive | 1166146 - 1167909 | 65551.0 |
| general secretion pathway protein gspb | SHEW_RS05215 | Not Available | Positive | 1167909 - 1169036 | 40156.5 |
| sodium:proton antiporter nhad | SHEW_RS05220 | Not Available | Negative | 1169183 - 1170430 | 45658.8 |
| glutamate-1-semialdehyde 2,1-aminomutase | SHEW_RS05225 | Not Available | Negative | 1171055 - 1172341 | 46073.4 |
| aspartate carbamoyltransferase | SHEW_RS05230 | Not Available | Negative | 1172369 - 1173388 | 37853.0 |
| 2tm domain-containing protein | SHEW_RS05235 | Not Available | Positive | 1173869 - 1174375 | 19343.8 |
Pathways
1442 pathways
Health Effects
No health effects information available for this bacterium.
